Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12684933 chr9:4094068 A/G KIAA1432 chr9:5629025-5776557:+ 0.43 5.98 5.09E-9 Box Plot
BLCA rs12684933 chr9:4094068 A/G KIAA2026 chr9:5881596-6007901:- 0.47 6.02 4.13E-9 Box Plot
BLCA rs12684933 chr9:4094068 A/G UHRF2 chr9:6413151-6507054:+ 0.5 6.18 1.67E-9 Box Plot
BLCA rs12695595 chr3:133303289 G/T MAGEC1 chrX:140991680-140997174:+ 0.57 6.21 1.38E-9 Box Plot
BLCA rs12708478 chr15:64095179 T/C VCX chrX:7810303-7812184:+ 0.34 6.02 4.08E-9 Box Plot
BLCA rs12723357 chr1:243118512 A/G CYorf15A chrY:21729235-21752308:+ 0.47 8.31 1.67E-15 Box Plot
BLCA rs12723357 chr1:243118512 A/G CYorf15B chrY:21758442-21767697:+ 0.4 7.74 9.03E-14 Box Plot
BLCA rs12723357 chr1:243118512 A/G DDX3Y chrY:15016019-15032390:+ 0.48 8.59 2.24E-16 Box Plot
BLCA rs12723357 chr1:243118512 A/G EIF1AY chrY:22737611-22755040:+ 0.43 7.4 8.81E-13 Box Plot
BLCA rs12723357 chr1:243118512 A/G KDM5D chrY:21865751-21906825:- 0.36 6.36 5.7E-10 Box Plot
BLCA rs12723357 chr1:243118512 A/G NCRNA00185 chrY:21034388-21040114:- 0.39 6.34 6.41E-10 Box Plot
BLCA rs12723357 chr1:243118512 A/G NCRNA00230B chrY:20488419-20492735:+ 0.45 6.57 1.6E-10 Box Plot
BLCA rs12723357 chr1:243118512 A/G NLGN4Y chrY:16634518-16957530:+ 0.39 6.88 2.47E-11 Box Plot
BLCA rs12723357 chr1:243118512 A/G PRKY chrY:7142013-7249589:+ 0.35 6 4.58E-9 Box Plot
BLCA rs12723357 chr1:243118512 A/G RPS4Y1 chrY:2709527-2800041:+ 0.37 6.21 1.42E-9 Box Plot